The budding yeast heterochromatic SIR complex resets upon exit from stationary phase - Institut de génétique moléculaire de Montpellier Access content directly
Preprints, Working Papers, ... Year : 2019

The budding yeast heterochromatic SIR complex resets upon exit from stationary phase

Pauline Vasseur
  • Function : Author
  • PersonId : 1297589
Marta Radman-Livaja

Abstract

The budding yeast SIR complex (Silent Information Regulator) is the principal actor in heterochromatin formation, which causes epigenetically regulated gene silencing phenotypes. The maternal chromatin bound SIR complex is disassembled during replication. Consequently, if heterochromatin is to be restored on both daughter strands, the SIR complex has to be reformed on both strands to pre-replication levels. The dynamics of SIR complex maintenance and reformation during the cell-cycle and in different growth conditions are however not clear. Understanding exchange rates of SIR subunits during the cell cycle and their distribution pattern to daughter chromatids after replication has important implications for how heterochromatic states may be inherited and therefore how epigenetic states are maintained from one cellular generation to the next. We used the tag switch RITE system to measure genome wide turnover rates of the SIR subunit Sir3 before and after exit from stationary phase and show that maternal Sir3 subunits are completely replaced with newly synthesized Sir3 at subtelomeric regions during the first cell cycle after release from stationary phase. The SIR complex is therefore not "inherited" and the silenced state has to be established de novo upon exit from stationary phase. Additionally, our analysis of genome-wide transcription dynamics shows that precise Sir3 dosage is needed for the optimal up-regulation of "growth" genes during the first cell-cycle after release from stationary phase.
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Dates and versions

hal-02390899 , version 1 (03-12-2019)
hal-02390899 , version 2 (29-10-2021)
hal-02390899 , version 3 (09-11-2023)

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Hrvoje Galic, Pauline Vasseur, Marta Radman-Livaja. The budding yeast heterochromatic SIR complex resets upon exit from stationary phase. 2019. ⟨hal-02390899v1⟩
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