<?xml version="1.0" encoding="utf-8"?>
<TEI xmlns="http://www.tei-c.org/ns/1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:hal="http://hal.archives-ouvertes.fr/" xmlns:gml="http://www.opengis.net/gml/3.3/" xmlns:gmlce="http://www.opengis.net/gml/3.3/ce" version="1.1" xsi:schemaLocation="http://www.tei-c.org/ns/1.0 http://api.archives-ouvertes.fr/documents/aofr-sword.xsd">
  <teiHeader>
    <fileDesc>
      <titleStmt>
        <title>HAL TEI export of hal-03349345</title>
      </titleStmt>
      <publicationStmt>
        <distributor>CCSD</distributor>
        <availability status="restricted">
          <licence target="https://creativecommons.org/publicdomain/zero/1.0/">CC0 1.0 - Universal</licence>
        </availability>
        <date when="2026-05-17T19:22:07+02:00"/>
      </publicationStmt>
      <sourceDesc>
        <p part="N">HAL API Platform</p>
      </sourceDesc>
    </fileDesc>
  </teiHeader>
  <text>
    <body>
      <listBibl>
        <biblFull>
          <titleStmt>
            <title xml:lang="en">Fecal Carriage of Extended-Spectrum β-Lactamase and Carbapenemase-Producing Enterobacterales Strains in Patients with Colorectal Cancer in the Oncology Unit of Amizour Hospital, Algeria: A Prospective Cohort Study</title>
            <author role="aut">
              <persName>
                <forename type="first">Abdelaziz</forename>
                <surname>Touati</surname>
              </persName>
              <idno type="halauthorid">891467-0</idno>
              <affiliation ref="#struct-302269"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Melissa</forename>
                <surname>Talbi</surname>
              </persName>
              <idno type="halauthorid">2287134-0</idno>
              <affiliation ref="#struct-302269"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Assia</forename>
                <surname>Mairi</surname>
              </persName>
              <idno type="halauthorid">1356017-0</idno>
              <affiliation ref="#struct-302269"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Abdelaziz</forename>
                <surname>Messis</surname>
              </persName>
              <idno type="halauthorid">2287135-0</idno>
              <affiliation ref="#struct-449100"/>
              <affiliation ref="#struct-302269"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Ahmed</forename>
                <surname>Adjebli</surname>
              </persName>
              <idno type="halauthorid">1228695-0</idno>
              <affiliation ref="#struct-302269"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Mustapha</forename>
                <surname>Louardiane</surname>
              </persName>
              <idno type="halauthorid">2287136-0</idno>
              <affiliation ref="#struct-1076832"/>
            </author>
            <author role="aut">
              <persName>
                <forename type="first">Jean Philippe</forename>
                <surname>Lavigne</surname>
              </persName>
              <email type="md5">6533db4b87bfedba174e05293e7fab21</email>
              <email type="domain">chu-nimes.fr</email>
              <idno type="idhal" notation="string">jean-philippe-lavigne</idno>
              <idno type="idhal" notation="numeric">1465399</idno>
              <idno type="halauthorid" notation="string">1446982-1465399</idno>
              <idno type="ORCID">https://orcid.org/0000-0002-9484-0304</idno>
              <idno type="IDREF">https://www.idref.fr/083907769</idno>
              <affiliation ref="#struct-139748"/>
              <affiliation ref="#struct-361498"/>
            </author>
            <editor role="depositor">
              <persName>
                <forename>Nathalie</forename>
                <surname>Salvy-Córdoba</surname>
              </persName>
              <email type="md5">7890636dd47161754cdda1846a7b4f9c</email>
              <email type="domain">umontpellier.fr</email>
            </editor>
          </titleStmt>
          <editionStmt>
            <edition n="v1" type="current">
              <date type="whenSubmitted">2021-09-20 14:42:31</date>
              <date type="whenModified">2025-11-25 10:44:03</date>
              <date type="whenReleased">2021-09-20 14:42:31</date>
              <date type="whenProduced">2020-11-01</date>
              <ref type="externalLink" target="https://www.liebertpub.com/doi/pdf/10.1089/mdr.2019.0350"/>
            </edition>
            <respStmt>
              <resp>contributor</resp>
              <name key="775913">
                <persName>
                  <forename>Nathalie</forename>
                  <surname>Salvy-Córdoba</surname>
                </persName>
                <email type="md5">7890636dd47161754cdda1846a7b4f9c</email>
                <email type="domain">umontpellier.fr</email>
              </name>
            </respStmt>
          </editionStmt>
          <publicationStmt>
            <distributor>CCSD</distributor>
            <idno type="halId">hal-03349345</idno>
            <idno type="halUri">https://hal.umontpellier.fr/hal-03349345</idno>
            <idno type="halBibtex">touati:hal-03349345</idno>
            <idno type="halRefHtml">&lt;i&gt;Microbial Drug Resistance&lt;/i&gt;, 2020, 26 (11), pp.1383-1389. &lt;a target="_blank" href="https://dx.doi.org/10.1089/mdr.2019.0350"&gt;&amp;#x27E8;10.1089/mdr.2019.0350&amp;#x27E9;&lt;/a&gt;</idno>
            <idno type="halRef">Microbial Drug Resistance, 2020, 26 (11), pp.1383-1389. &amp;#x27E8;10.1089/mdr.2019.0350&amp;#x27E9;</idno>
            <availability status="restricted"/>
          </publicationStmt>
          <seriesStmt>
            <idno type="stamp" n="INSERM">INSERM - Institut national de la santé et de la recherche médicale</idno>
            <idno type="stamp" n="BS">Biologie-Santé</idno>
            <idno type="stamp" n="UNIV-MONTPELLIER">Université de Montpellier</idno>
            <idno type="stamp" n="UM-2015-2021" corresp="UNIV-MONTPELLIER">Université de Montpellier (2015-2021)</idno>
          </seriesStmt>
          <notesStmt>
            <note type="audience" n="2">International</note>
            <note type="popular" n="0">No</note>
            <note type="peer" n="1">Yes</note>
          </notesStmt>
          <sourceDesc>
            <biblStruct>
              <analytic>
                <title xml:lang="en">Fecal Carriage of Extended-Spectrum β-Lactamase and Carbapenemase-Producing Enterobacterales Strains in Patients with Colorectal Cancer in the Oncology Unit of Amizour Hospital, Algeria: A Prospective Cohort Study</title>
                <author role="aut">
                  <persName>
                    <forename type="first">Abdelaziz</forename>
                    <surname>Touati</surname>
                  </persName>
                  <idno type="halauthorid">891467-0</idno>
                  <affiliation ref="#struct-302269"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Melissa</forename>
                    <surname>Talbi</surname>
                  </persName>
                  <idno type="halauthorid">2287134-0</idno>
                  <affiliation ref="#struct-302269"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Assia</forename>
                    <surname>Mairi</surname>
                  </persName>
                  <idno type="halauthorid">1356017-0</idno>
                  <affiliation ref="#struct-302269"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Abdelaziz</forename>
                    <surname>Messis</surname>
                  </persName>
                  <idno type="halauthorid">2287135-0</idno>
                  <affiliation ref="#struct-449100"/>
                  <affiliation ref="#struct-302269"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Ahmed</forename>
                    <surname>Adjebli</surname>
                  </persName>
                  <idno type="halauthorid">1228695-0</idno>
                  <affiliation ref="#struct-302269"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Mustapha</forename>
                    <surname>Louardiane</surname>
                  </persName>
                  <idno type="halauthorid">2287136-0</idno>
                  <affiliation ref="#struct-1076832"/>
                </author>
                <author role="aut">
                  <persName>
                    <forename type="first">Jean Philippe</forename>
                    <surname>Lavigne</surname>
                  </persName>
                  <email type="md5">6533db4b87bfedba174e05293e7fab21</email>
                  <email type="domain">chu-nimes.fr</email>
                  <idno type="idhal" notation="string">jean-philippe-lavigne</idno>
                  <idno type="idhal" notation="numeric">1465399</idno>
                  <idno type="halauthorid" notation="string">1446982-1465399</idno>
                  <idno type="ORCID">https://orcid.org/0000-0002-9484-0304</idno>
                  <idno type="IDREF">https://www.idref.fr/083907769</idno>
                  <affiliation ref="#struct-139748"/>
                  <affiliation ref="#struct-361498"/>
                </author>
              </analytic>
              <monogr>
                <idno type="halJournalId" status="VALID">17073</idno>
                <idno type="issn">1076-6294</idno>
                <title level="j">Microbial Drug Resistance</title>
                <imprint>
                  <publisher>Mary Ann Liebert</publisher>
                  <biblScope unit="volume">26</biblScope>
                  <biblScope unit="issue">11</biblScope>
                  <biblScope unit="pp">1383-1389</biblScope>
                  <date type="datePub">2020-11-01</date>
                </imprint>
              </monogr>
              <idno type="doi">10.1089/mdr.2019.0350</idno>
            </biblStruct>
          </sourceDesc>
          <profileDesc>
            <langUsage>
              <language ident="en">English</language>
            </langUsage>
            <textClass>
              <keywords scheme="author">
                <term xml:lang="en">Fecal carriage</term>
                <term xml:lang="en">Colorectal cancer</term>
                <term xml:lang="en">OXA-48</term>
                <term xml:lang="en">Enterobacterales</term>
                <term xml:lang="en">ESBL</term>
              </keywords>
              <classCode scheme="mesh">Algeria / epidemiology; Anti-Bacterial Agents / pharmacology; Bacterial Proteins / metabolism; Carrier State / epidemiology; Carrier State / microbiology;Colorectal Neoplasms / microbiology; Enterobacteriaceae / drug effects; Enterobacteriaceae / isolation &amp; purification</classCode>
              <classCode scheme="mesh">Enterobacteriaceae / metabolism; Enterobacteriaceae Infections / drug therapy; Enterobacteriaceae Infections / epidemiology; Enterobacteriaceae Infections / microbiology</classCode>
              <classCode scheme="mesh">Feces / microbiology; Female; Hospitals; Humans; Male; Microbial Sensitivity Tests / methods</classCode>
              <classCode scheme="mesh">Middle Aged; Plasmids / genetics; Prospective Studies; Beta-Lactamases / metabolism</classCode>
              <classCode scheme="halDomain" n="sdv.can">Life Sciences [q-bio]/Cancer</classCode>
              <classCode scheme="halDomain" n="sdv.mp.bac">Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology</classCode>
              <classCode scheme="halTypology" n="ART">Journal articles</classCode>
              <classCode scheme="halOldTypology" n="ART">Journal articles</classCode>
              <classCode scheme="halTreeTypology" n="ART">Journal articles</classCode>
            </textClass>
            <abstract xml:lang="en">
              <p>The prevalence of extended-spectrum β-lactamase (ESBL)-producing Enterobacterales (ESBL-E) and carbapenemase-producing Enterobacterales (CPE) is now disseminated worldwide. This study aims to describe the prevalence of ESBL and CPE fecal carriage in colorectal cancer patients. Methods: All patients admitted to the oncology service of Amizour hospital (Algeria) for colorectal cancer chemotherapy from March to May 2019 were screened for ESBL-E or CPE fecal carriage. After culturing on chromogenic media, the presumptive colonies were identified by mass spectroscopy. Antibiotic susceptibility testing was performed according to the European Committee on Antimicrobial Susceptibility Testing. The β-lactamases encoding genes and plasmid-mediated quinolone-resistant genes were screened by PCR and sequencing. Results: ESBL-E strains were recovered from rectal swabs in 6 patients (14.3%) and only 1 patient (2.4%) was found a carrier for OXA-48-producing Klebsiella pneumoniae. The most frequently encountered species among ESBL-E was Escherichia coli (n = 5), followed by K. pneumoniae (n = 1). PCR and sequencing showed that four isolates harbored the blaCTX-M-15 gene and two strains harbored the blaCTX-M-14 gene. Also, one strain of K. pneumoniae was found to harbor both qepA and qnrS genes. Conclusion: This study highlighted the fecal carriage of ESBL-E and OXA-48-producing Enterobacterales strains in colorectal cancer patients.</p>
            </abstract>
          </profileDesc>
        </biblFull>
      </listBibl>
    </body>
    <back>
      <listOrg type="structures">
        <org type="institution" xml:id="struct-302269" status="VALID">
          <idno type="IdRef">131642863</idno>
          <idno type="ISNI">0000000106907656</idno>
          <idno type="ROR">https://ror.org/03yb2hp88</idno>
          <idno type="Wikidata">Q1117434</idno>
          <orgName>Université Abderrahmane Mira [Université de Béjaïa] = University of Béjaïa = جامعة بجاية</orgName>
          <orgName type="acronym">UB</orgName>
          <date type="start">1983-10-01</date>
          <desc>
            <address>
              <addrLine>Campus Targa Ouzemour, Béjaïa, Algérie</addrLine>
              <country key="DZ"/>
            </address>
            <ref type="url">http://www.univ-bejaia.dz/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-449100" status="VALID">
          <idno type="ROR">https://ror.org/03e75b898</idno>
          <orgName>Université Mohamed El Bachir El Ibrahimi [Bordj Bou Arréridj]</orgName>
          <desc>
            <address>
              <addrLine>Bordj Bou Arréridj, El-Anasser</addrLine>
              <country key="DZ"/>
            </address>
            <ref type="url">http://www.univ-bba.dz/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-1076832" status="INCOMING">
          <orgName>Hôpital Ben Merrad El Meki</orgName>
          <desc>
            <address>
              <addrLine>Service d'oncologie, Hôpital Ben Merrad El Meki Amizour, Bejaia</addrLine>
              <country key="DZ"/>
            </address>
          </desc>
        </org>
        <org type="laboratory" xml:id="struct-139748" status="OLD">
          <idno type="RNSR">201119395N</idno>
          <orgName>Virulence bactérienne et maladies infectieuses</orgName>
          <orgName type="acronym">VBMI</orgName>
          <date type="end">2021-12-31</date>
          <desc>
            <address>
              <addrLine>Faculté de médecine, 186 chemin du carreau de lanes, CS83021, 30908 Nîmes Cedex 02</addrLine>
              <country key="FR"/>
            </address>
          </desc>
          <listRelation>
            <relation name="U1047" active="#struct-303623" type="direct"/>
            <relation active="#struct-410122" type="direct"/>
          </listRelation>
        </org>
        <org type="regroupinstitution" xml:id="struct-361498" status="VALID">
          <idno type="ROR">https://ror.org/0275ye937</idno>
          <orgName>Centre Hospitalier Universitaire de Nîmes</orgName>
          <orgName type="acronym">CHU Nîmes</orgName>
          <desc>
            <address>
              <addrLine>4 Rue du Professeur Robert Debré, 30029 Nîmes</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.chu-nimes.fr/</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-303623" status="VALID">
          <idno type="IdRef">026388278</idno>
          <idno type="ROR">https://ror.org/02vjkv261</idno>
          <orgName>Institut National de la Santé et de la Recherche Médicale</orgName>
          <orgName type="acronym">INSERM</orgName>
          <desc>
            <address>
              <addrLine>101, rue de Tolbiac, 75013 Paris</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.inserm.fr</ref>
          </desc>
        </org>
        <org type="institution" xml:id="struct-410122" status="OLD">
          <idno type="ISNI">0000000120970141</idno>
          <idno type="ROR">https://ror.org/051escj72</idno>
          <orgName>Université de Montpellier</orgName>
          <orgName type="acronym">UM</orgName>
          <date type="end">2021-12-31</date>
          <desc>
            <address>
              <addrLine>163 rue Auguste Broussonnet - 34090 Montpellier</addrLine>
              <country key="FR"/>
            </address>
            <ref type="url">http://www.umontpellier.fr/</ref>
          </desc>
        </org>
      </listOrg>
    </back>
  </text>
</TEI>