Article dans une revue

BioTIME: A database of biodiversity time series for the Anthropocene

Maria Dornelas Andrew Antão Andrew Moyes John Bates Anne Magurran Dušan Adam Asem Akhmetzhanova Ward Appeltans ¹ José Arcos Andrew Hale ² Narayanan Ayyappan ³ Andrew Badihi Andrew Baird Andrew Barbosa Tiago Egydio Barreto Claus Bässler Victor Bellgrove Jon Belmaker Lisandro Benedetti-Cecchi ⁴ Brian Bett Anne Bjorkman Magdalena Błażewicz S. Blowes Christopher Bloch Timothy Bonebrake Andrew Boyd Matt Bradford ⁵ Andrew Brooks James Brown Helge Bruelheide ⁶ Phaedra Budy Fernando Carvalho Mia Castañeda-Moya Allen Chen John Chamblee James Chase John Siegwart Collier Sharon Collinge Richard Condit Elisabeth Cooper Hans Cornelissen Unai Cotano Kyle Kyle Crow Gabriel Damasceno Claire Davies Robert Davis Frank Frank Steven Degraer ⁷ Victor Doherty Con Dunn Giselda Durigan ⁸ J. Emmett Duffy Dor Edelist Graham Edgar Robin Elahi Sara Elmendorf Anders Enemar Con Ernest Con Escribano Marc Estiarte ⁹ Con Evans Tung-Yung Fan ¹⁰ Luiz Turini Farah Luiz Loureiro Fernandes Jan Farneda Alessandra Fidelis ¹¹ Robert Fitt Maria Fosaa Geraldo Antonio Daher Correa Franco James Frank William Fraser ¹² Hernando García Robert Cazzolla Gatti Or Givan ¹³ Elizabeth Gorgone-Barbosa William Gould Corinna Gries Gary Grossman Julio Gutierréz Stephen Hale Mark Harmon John Harte Gary Haskins Donald Henshaw John Hermanutz Con Hidalgo Pedro Higuchi Andrew Hoey Gert van Hoey Annika Hofgaard ¹⁴ Kristen Holeck Robert Hollister Richard Holmes James Hoogenboom Chih-Hao Hsieh Stephen Hubbell Falk Huettmann ¹⁵ Christine Huffard Carolina Hurlbert Natália Macedo Ivanauskas Jan Janík Jan Jandt Anna Jażdżewska ¹⁶ Tore Johannessen John Johnstone Jon Jones Andrew Jones Andrew Kang Con Kartawijaya Erin Keeley Con Kelt Andrew Kinnear Kari Klanderud Halvor Knutsen Christopher Koenig Andrew Kortz Kamil Král Linda Kuhnz James Kuo David Kushner Claire Laguionie-Marchais Lesley Lancaster ¹⁷ Cheol Min Lee Jon Lefcheck Esther Lévesque ¹⁸ David Lightfoot Francis Lloret John Lloyd ¹⁹ Adrià López-Baucells Maite Louzao ²⁰ Joshua Madin Borgþór Magnússon Shahar Malamud Andrew Matthews Kent Mcfarland Brian Mcgill Diane Mcknight Con Mclarney Con Meador Peter Meserve Daniel Metcalfe Christoph Sal Anders Michelsen ²¹ Nataliya Milchakova Tom Moens Even Moland ²² Andrew W. Moore ²³ Con Mathias Moreira Jörg Müller ²⁴ Grace Murphy Isla Myers-Smith Randall Myster Andrew Naumov Francis Neat Nelson Nelson Michael Paul Nelson Stephen Newton Natalia Norden ²⁵ Jeffrey Oliver Esben Olsen Vladimir Onipchenko Krzysztof Pabis Robert Pabst Alain Paquette ²⁶ Con Pardede Andrew D. Paterson ²⁷ Raphaël Pelissier ²⁸ Josep Peñuelas ⁹ Con Pérez-Matus Oscar Pizarro ²⁹ Francesco Pomati Eric Post ³⁰ Herbert Prins John Priscu Pieter Provoost Kathleen Prudic Erkki Pulliainen B. Ramesh Olivia Mendivil Ramos Andrew Rassweiler ³¹ Jose Eduardo Rebelo Daniel Reed Peter Reich ³² Suzanne Remillard Richard Richardson Itai van Rijn Ricardo Rocha Victor Rivera-Monroy Christian Rixen ³³ Kevin Robinson Ricardo Ribeiro Rodrigues José de Cerqueira Rossa-Feres Lars Rudstam Henry Ruhl Con Ruz Eric Sampaio Nancy Rybicki Andrew Rypel Sofia Sal Beatriz Salgado Flávio Roberto Santos ³⁴ Ana Paula Savassi-Coutinho Sara Scanga Jochen Schmidt Robert Schooley Con Setiawan Kwang-Tsao Shao ³⁵ Gaius Woods Sally Sherman Thomas Sherry Jacek Siciński ¹⁶ Caya Sievers Ana Carolina da Silva Carl Rodrigues da Silva Fabio Silveira Con Slingsby Tracey Smart Sara Snell Con Soudzilovskaia Jan Souza Flaviana Maluf Souza Vinícius Castro Souza Christopher Stallings Rowan Stanforth Emily Stanley José Mauro Sterza Maarten Stevens Rick Stuart-Smith Yzel Rondon Suarez Sara Supp Jorge Yoshio Tamashiro Con Tarigan Gary Thiede Simon Thorn Anne Tolvanen Maria Teresa Zugliani Toniato Robert Twilley Gediminas Vaitkus Nelson Valdivia ³⁶ Martha Isabel Vallejo Thomas Valone Carl van Colen Jan Vanaverbeke ³⁷ Fabio Venturoli Hans Verheye Marcelo Vianna Rui Vieira Tomáš Vrška Con Quang Vu Lien van Vu Robert Waide Conor Waldock Dave Watts Sara Webb Tomasz Wesołowski ³⁸ Ethan White Claire Widdicombe ³⁹ Dustin Wilgers Richard Williams Stefan Williams Mark Williamson Michael Willig Trevor Willis Sonja Wipf Kerry Woods Eric Woehler ⁴⁰ Kyle Zawada Michael Zettler

1 International Oceanographic Data and Information Exchange (IODE) of the Intergovernmental Oceanographic Commission of UNESCO, Oostende

2 Safety science group

3 IFP - Institut Français de Pondichéry

4 Department of Biology [Pisa]

5 CSIRO Land and Water

6 Institute of Biology/Geobotany and Botanical Garden

7 Management Unit of the Mathematical Model of the North Sea

8 Floresta Estadual Assis

9 Global Ecology Unit CREAF-CEAB-CSIC

10 National Museum of Marine Biology and Aquarium

11 USP - Universidade de São Paulo

12 Polar Oceans Research Group [USA]

13 Department of Zoology

14 NINA - Norwegian Institute for Nature Research

15 EWHALE Laboratory of Biology and Wildlife Department

16 Laboratory of Polar Biology and Oceanobiology

17 EEB-UCSC - Dept Ecol Evol Biol, Univ California SC

18 Département de chimie-biologie & Centre d’études nordiques [CANADA]

19 UBC - Human Communication Technologies Research Laboratory

20 Instituto Espanol de Oceanografia

21 Department of Biology [Copenhagen]

22 IMR - Flødevigen Research Station

23 Computer Laboratory [Cambridge]

24 Aarhus University [Aarhus]

25 EDB - Evolution et Diversité Biologique

26 Centre for Forest Research (CFR)

27 The Centre for Applied Genomics, Toronto

28 UMR AMAP - Botanique et Modélisation de l'Architecture des Plantes et des Végétations

29 COPAS - Centro de Investigación Oceanográfica en el Pacífico Sur Oriental

30 Department of Biology

31 Department of Biological Science [Tallahassee]

32 Department of Forest Resources

33 WSL Institute for Snow and Avalanche Research SLF

34 Communication Systems Group [Zurich]

35 Academia Sinica

36 Facultad Ciencias del Mar

37 Marine Biology Section

38 Department of Avian Ecology

39 PML - Plymouth Marine Laboratory

40 IMAS - Institute for Marine and Antarctic Studies [Hobart]

Abstract : Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2). Time period and grain: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.

Keywords : Turnover Biodiversity Global Spatial Species richness

Type de document :

Article dans une revue

Domaine :

Sciences du Vivant [q-bio] / Biodiversité / Systématique, phylogénie et taxonomie

Sciences du Vivant [q-bio] / Ecologie, Environnement / Ecosystèmes

Sciences du Vivant [q-bio] / Biologie végétale / Botanique

Sciences de l'environnement / Biodiversité et Ecologie

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https://hal.umontpellier.fr/hal-01883395
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Dernière modification le : vendredi 5 août 2022 - 14:29:47
Archivage à long terme le : : mercredi 26 février 2020 - 18:06:59

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